Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829300.1_cds_XP_016503687.1_17207
CDS Infomation

[gene=LOC107821749] [db_xref=GeneID:107821749] [protein=26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2] [protein_id=XP_016503687.1] [location=complement(join(9852..9890,10822..10890,11007..11110,12169..12292,13168..13474,13557..13766,13850..13964,15799..15904,17220..17333,17444..17455))] [gbkey=CDS]
Sequence

ATGGTTCTCGAGGCAACAATGATCTGTATCGACAATTCTGAGTGGATGCGGAATGGAGAT
TATCCGCGCAATCGATTCGAAGCTCAAACTGACGCAGTTAGCTTATTTTGTGGTTCCAAA
ACCCAGTCTAATCCCGAGAATACAGTTGGAGTATTGACCATGGCTGGCAAAGGAGTTCGT
GTATTGGTTACTCCTACCAGCGACCTAGGAAAAATGTTAGCTTGCACGCACGGATTAGAT
ATCGGTGGTGAATTGAATTTGGCTGCTGGAATCCAGGTGGCACAGTTGGCTCTGAAGCAT
CGGCAAAACAAAAAGCAACAGCAGAGGATCATTGTTTTTGCTGGCAGTCCTGTTAAACAG
GACAAGAAGGTCTTGGAGATGATTGGAAGAAAGTTGAAGAAGAATAGTGTAGCTCTTGAT
GTTATTAGTTTTGGTGAAGAAGATGAGGGGAAGACTGAGAAGCTTGAGGCATTAGTTGCT
GCAGTAAACAACAATGATAGCAGTCGCATCATCCATATTCCTCCTGGACCTACTGCTCTT
TCTGATGTGCTAATAAGTACTCCTATCTTTACTGGAGATGGTGAGGGTGGAAGTGGATTT
GCTGCAGCCGCTGCTGCGGCTGCTGCTGGTGGAGGGTCTGGCTATGATTTTGGTGTAGAT
CCTAATTTGGATCCTGAACTTGCTCTGGCACTTCGAGTTTCAATGGAGGAGGAACGGGCT
AGGCAAGAAGCAGCAGCAAAGAAAGCTGCAGAAGAATCTGCACAAGAAAAAGGAGAAATG
CAGTCAACTTCTCAGGATATTACAATGACTGAAAATGTCGGTGCCAGAACATCTGAAACT
GAAAACAAGGCAGTTGACCTAATGGATGATGAGAATGCACTGTTACAGCAAGCACTTGCA
ATGTCGATGGATGATTCTTCCTCTAACATTACTACAAGAGACACGGACATGTCAGAAGCA
GCTTCTGAAGATCAAGACTTAGCACTAGCTCTTCAATTGTCAGTGCAGGACAATACAAAA
GATGATTCAGACCAGACAGATGTGACTAAACTGTTGGCGGACCAATCATTCGTGTCATCA
ATTCTTGCTTCACTTCCAGGTGTTGATCCAAATGATCCTTCAGTTAAAGATTTACTTGCT
TCCATGCAAGGCCAGTCTGAGAAGGATGAGGACAAGGAACAGAAAGAGGACAAAAAGTGA

Peptide Sequence

PEP ID

XP_016503687.1
PEP Infomation

PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2 [Nicotiana tabacum]
Sequence

MVLEATMICIDNSEWMRNGDYPRNRFEAQTDAVSLFCGSKTQSNPENTVGVLTMAGKGVR
VLVTPTSDLGKMLACTHGLDIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKQ
DKKVLEMIGRKLKKNSVALDVISFGEEDEGKTEKLEALVAAVNNNDSSRIIHIPPGPTAL
SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGGSGYDFGVDPNLDPELALALRVSMEEERA
RQEAAAKKAAEESAQEKGEMQSTSQDITMTENVGARTSETENKAVDLMDDENALLQQALA
MSMDDSSSNITTRDTDMSEAASEDQDLALALQLSVQDNTKDDSDQTDVTKLLADQSFVSS
ILASLPGVDPNDPSVKDLLASMQGQSEKDEDKEQKEDKK

Transcript Sequence

Gene sequence data has not been registered.